Antigen

Antigen Class

TFs and others

Antigen

CDC45

Cell type

Cell type Class

Digestive tract

Cell type

HCT 116

Primary Tissue

Colon

Tissue Diagnosis

Carcinoma

Sample

source_name

Colorectal Cancer

cell type

HCT116 cell line stably expressing MUT-ORC1-3xFlag

chip antibody

anti-CDC45

treatment

Untreated

replicate

2

geo_loc_name

missing

collection_date

missing

Sequenced DNA Library

library_name

GSM6265482

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Phenol:chlorophorm Based on Blecher-Gonen et al. 2013

Sequencing Platform

instrument_model

NextSeq 2000

hg38

Number of total reads

37230955

Reads aligned (%)

83.0

Duplicates removed (%)

28.3

Number of peaks

644 (qval < 1E-05)

hg19

Number of total reads

37230955

Reads aligned (%)

82.7

Duplicates removed (%)

28.5

Number of peaks

629 (qval < 1E-05)